Community Dynamics Metrics
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Documentation for package ‘codyn’ version 2.0.5
Help Pages
| codyn-package | Community Dynamics Metrics |
| abundance_change | Species Abundance Changes |
| abundance_difference | Abundance Differences |
| collins08 | Konza data from Collins et al. 2008 |
| community_diversity | Community Diversity |
| community_stability | Community Stability |
| community_structure | Community Structure |
| confint.cyclic_shift | Confidence Intervals from a Cyclic Shift Permutation |
| curve_change | Curve Change |
| curve_difference | Curve Difference |
| cyclic_shift | Cyclic Shift Permutations |
| knz_001d | Data from Konza Prairie, watershed 001d |
| mean_rank_shift | Mean Rank Shifts |
| multivariate_change | Using dissimilarity-based measures to calculate changes in composition and dispersion |
| multivariate_difference | Using dissimilarity-based measures to calculate differences in composition and dispersion between pairs of treatments at a single time point |
| pplots | Phosphorus plots data from Avolio et al. 2014 |
| RAC_change | Rank Abundance Curve Changes |
| RAC_difference | Rank Abundance Curve Differences |
| rank_shift | Mean Rank Shifts |
| rate_change | Rate of community change over successive time intervals |
| rate_change_interval | Differences in community composition over successive time lag intervals |
| synchrony | Species synchrony |
| temporal_torus_translation | Cyclic Shift Permutations |
| turnover | Species Turnover |
| variance_ratio | Variance Ratio |