Identifying clusters in genomics data by recursive partitioning

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Documentation for package ‘clusterGenomics’ version 1.0

Help Pages

exData1 A simulated data set with 5 true clusters
exData2 A simulated data set with 4 true clusters
gap The gap statistic
part Partitioning Algorithm based on Recursive Thresholding
plotColorbarCol Add a colorbar above a heatmap.
plotColorbarRow Add a colorbar on the left side of a heatmap.
plotColorRange Plot color scale.
plotHeatmap Plot a heatmap
plotTreeCol Add a column dendrogram to a heatmap.
plotTreeRow Add a row dendrogram to a heatmap.