Building and Training Neural Networks

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Documentation for package ‘cito’ version 1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

cito-package	'cito': Building and training neural networks
ALE	Accumulated Local Effect Plot (ALE)
ALE.citodnn	Accumulated Local Effect Plot (ALE)
ALE.citodnnBootstrap	Accumulated Local Effect Plot (ALE)
analyze_training	Visualize training of Neural Network
avgPool	Average pooling layer
cito	'cito': Building and training neural networks
cnn	CNN
coef.citocnn	Returns list of parameters the neural network model currently has in use
coef.citodnn	Returns list of parameters the neural network model currently has in use
coef.citodnnBootstrap	Returns list of parameters the neural network model currently has in use
conditionalEffects	Calculate average conditional effects
conditionalEffects.citodnn	Calculate average conditional effects
conditionalEffects.citodnnBootstrap	Calculate average conditional effects
config_lr_scheduler	Creation of customized learning rate scheduler objects
config_optimizer	Creation of customized optimizer objects
config_tuning	Config hyperparameter tuning
continue_training	Continues training of a model generated with 'dnn' or 'cnn' for additional epochs.
continue_training.citocnn	Continues training of a model generated with 'dnn' or 'cnn' for additional epochs.
continue_training.citodnn	Continues training of a model generated with 'dnn' or 'cnn' for additional epochs.
continue_training.citodnnBootstrap	Continues training of a model generated with 'dnn' or 'cnn' for additional epochs.
conv	Convolutional layer
create_architecture	CNN architecture
dnn	DNN
e	Embeddings
findReTrmClasses	list of specials - taken from enum.R
linear	Linear layer
maxPool	Maximum pooling layer
PDP	Partial Dependence Plot (PDP)
PDP.citodnn	Partial Dependence Plot (PDP)
PDP.citodnnBootstrap	Partial Dependence Plot (PDP)
plot.citoarchitecture	Plot the CNN architecture
plot.citocnn	Plot the CNN architecture
plot.citodnn	Creates graph plot which gives an overview of the network architecture.
plot.citodnnBootstrap	Creates graph plot which gives an overview of the network architecture.
predict.citocnn	Predict from a fitted cnn model
predict.citodnn	Predict from a fitted dnn model
predict.citodnnBootstrap	Predict from a fitted dnn model
print.avgPool	Print pooling layer
print.citoarchitecture	Print class citoarchitecture
print.citocnn	Print class citocnn
print.citodnn	Print class citodnn
print.citodnnBootstrap	Print class citodnn
print.conditionalEffects	Print average conditional effects
print.conditionalEffectsBootstrap	Print average conditional effects
print.conv	Print conv layer
print.linear	Print linear layer
print.maxPool	Print pooling layer
print.summary.citodnn	Print method for class summary.citodnn
print.summary.citodnnBootstrap	Print method for class summary.citodnn
print.transfer	Print transfer model
residuals.citodnn	Extract Model Residuals
simulate_shapes	Data Simulation for CNN
summary.citocnn	Summary citocnn
summary.citodnn	Summarize Neural Network of class citodnn
summary.citodnnBootstrap	Summarize Neural Network of class citodnn
sumTerms	combine a list of formula terms as a sum
transfer	Transfer learning
tune	Tune hyperparameter