convert.standard.format {chicane}

convert.standard.format

Description

Create a file in standard format for cross compatability including with WashU Epigenome Browser.

Usage

convert.standard.format(chicane.results, file.name = "")

Arguments

chicane.results

Path to CHiCANE interaction calls file

file.name

Path to output file

Value

TRUE if output files are created successfully

Author(s)

Andrea Gillespie, Syed Haider

Examples

chicane.results <- system.file(
   'extdata', 'T47D_2q35_filtered_chicane_calls.txt', 
   package = 'chicane'
   );
 output.file = file.path(tempdir(), 'temp_standard_format.txt');
	convert.standard.format(chicane.results, file.name = output.file);