cgdsr-test {cgdsr}R Documentation

Simple test suite for CGDS object.

Description

Queries the CGDS API and returns results of the tests.

Usage

## S3 method for class 'CGDS'
test(x, ...)

Arguments

x

A CGDS object.

...

Not used.

Details

A set of simple tests are evaluated. The format of the returned output from the following queries are tested: "getCancerStudies()", "getCaselists()", and "getGeneticProfiles()"

Value

Test results in text format.

Author(s)

<jacobsen@cbio.mskcc.org>

References

cBio Cancer Genomics Portal: http://www.cbioportal.org/

See Also

cgdsr,CGDS

Examples

# Create CGDS object
mycgds = CGDS("http://www.cbioportal.org/")

# Run tests
test(mycgds)

[Package cgdsr version 1.3.0 Index]