| callNCW |
Calculate normalized consensus weight(NCW) matrix based on permutation. |
| ccml |
A two-step consensus clustering inputing multiple predictive labels with different sample coverages (missing labels) |
| example_data |
The input data for example |
| plotCompareCW |
Plot of original consensus weights vs. normalized consensus weights grouping by the number of co-appeared percent of clustering(non-missing). |
| randConsensusMatrix |
Calculate consensus weight matrix based on the permuted input label matrix. Internal function used by 'callNCW' |
| spectralClusteringAffinity |
Perform spectral clustering algorithms for an affinity matrix, using SNFtool::spectralClustering. |
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