get_chemical_details_batch {ccdR}

Retrieve chemical details from DTXSID of DTXCID in batch search

Description

Retrieve chemical details from DTXSID of DTXCID in batch search

Usage

get_chemical_details_batch(
  DTXSID = NULL,
  DTXCID = NULL,
  Projection = "chemicaldetailstandard",
  API_key = NULL,
  rate_limit = 0L,
  verbose = FALSE
)

Arguments

DTXSID

The chemical identifier DTXSID

DTXCID

The chemical identifier DTXCID

Projection

The format and chemical detail data returned. Allowed values are 'chemicaldetailall', 'chemicaldetailstandard', chemicalidentifier', 'chemicalstructure', 'ntatoolkit', ccdchemicaldetails'. If left empty or there is a mismatch, the default format will be 'chemicaldetailstandard'.

API_key

The user-specific API key

rate_limit

Number of seconds to wait between each request

verbose

A logical indicating if some “progress report” should be given.

Value

A data.table (DTXSID) or a named list of data.tables (DTXCID) containing chemical information for the chemicals with DTXSID or DTXCID matching the input parameter.

Examples

# Pull chemical details for multiple chemicals by dtxsid
dtxsids <- c('DTXSID7020182', 'DTXSID2021315')
dtxsid_details <- get_chemical_details_batch(DTXSID = dtxsid)
# Pull chemical details for multiple chemicals by dtxcid
dtxcids <- c('DTXCID30182', 'DTXCID001315')
dtxcid_details <- get_chemical_details_batch(DTXCID = dtxcids)