Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data

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Documentation for package ‘ccRemover’ version 1.0.4

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bootstrap_diff Calculates the difference in the loading score for cell-cycle and control genes
ccRemover Removes the effect of the cell-cycle
dat A simulated scRNA-Seq data.
gene_indexer Identifies genes annotated to the cell-cycle
get_diff Calculates the average load difference between the cell-cycle genes and control genes for each component.
hello Hello, World!
human_cell_cycle_genes Homo Sapien genes which are annotated to the cell-cycle
mouse_cell_cycle_genes Mus Musculus genes which are annotated to the cell-cycle
t.cell_data Single-Cell RNA-Seq data from differentiating T-helper cells