Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data

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Documentation for package ‘ccRemover’ version 1.0.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

bootstrap_diff	Calculates the difference in the loading score for cell-cycle and control genes
ccRemover	Removes the effect of the cell-cycle
dat	A simulated scRNA-Seq data.
gene_indexer	Identifies genes annotated to the cell-cycle
get_diff	Calculates the average load difference between the cell-cycle genes and control genes for each component.
hello	Hello, World!
human_cell_cycle_genes	Homo Sapien genes which are annotated to the cell-cycle
mouse_cell_cycle_genes	Mus Musculus genes which are annotated to the cell-cycle
t.cell_data	Single-Cell RNA-Seq data from differentiating T-helper cells