AIC.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
AIC.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
AIC.logLik.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
AIC.logLik.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
ancestral |
Posterior density of a node |
ancestral.cauphyfit |
Posterior density of a node |
ancestral.cauphylm |
Posterior density of a node |
cauphylm |
Phylogenetic Regression using a Cauchy Process |
coef.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
coef.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
compute_vcov |
Compute Approximated Variance Covariance Matrix |
confint.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
confint.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
fitCauchy |
Model fitting for a Cauchy Process |
hdi.ancestralCauchy |
Highest (Posterior) Density Interval |
increment |
Posterior density of an increment |
increment.cauphyfit |
Posterior density of an increment |
increment.cauphylm |
Posterior density of an increment |
lizards |
Greater Antillean Anolis lizard dataset |
logDensityTipsCauchy |
Log Density of a Cauchy Process |
logLik.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
logLik.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
plot.ancestralCauchy |
Plot for class 'ancestralCauchy' |
plot.profile.cauphyfit |
Plot for class 'profile.cauphyfit' |
plot_asr |
Plot Ancestral States Reconstructions |
posteriorDensityAncestral |
Posterior density of a node |
posteriorDensityIncrement |
Posterior density of an increment |
predict.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
print.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
print.cauphylm |
Generic Methods for S3 class 'cauphylm'. |
profile.cauphyfit |
Method for Profiling 'cauphyfit' Objects |
rTraitCauchy |
Cauchy Trait Simulation |
vcov.cauphyfit |
Generic Methods for S3 class 'cauphyfit'. |
vcov.cauphylm |
Generic Methods for S3 class 'cauphylm'. |