Categorical Bayesian Network Inference


[Up] [Top]

Documentation for package ‘catnet’ version 1.15.7

Help Pages

A B C D I L N

catnet-package catnet: Categorical Bayesian network inference

-- A --

alarmnet The ALARM network

-- B --

boston Classification demonstration
breast Breast cancer data

-- C --

catnet catnet: Categorical Bayesian network inference
catNetwork Class "catNetwork"
catNetwork-class Class "catNetwork"
catNetworkDistance Class "catNetworkDistance"
catNetworkDistance-class Class "catNetworkDistance"
catNetworkEvaluate Class "catNetworkEvaluate"
catNetworkEvaluate-class Class "catNetworkEvaluate"
cnCatnetFromBif Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnCatnetFromBif-method Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnCatnetFromEdges catNetwork from Edges
cnCatnetFromEdges-method catNetwork from Edges
cnCatnetFromSif Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnCatnetFromSif-method Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnCluster Network Clustering
cnCluster-method Network Clustering
cnClusterMI Network Clustering
cnClusterSep Network Clustering
cnClusterSep-method Network Clustering
cnCompare Network Comparison
cnCompare-method Network Comparison
cnComplexity Network Complexity
cnComplexity-method Network Complexity
cnCondProb Probability Calculations
cnCondProb-method Probability Calculations
cnDiscretize Data Categorization
cnDot Network Description File
cnDot-method Network Description File
cnEdgeDistanceKL Pairwise Node Entropy
cnEdgeDistancePearson Pairwise Node Entropy
cnEdges Network Edges
cnEdges-method Network Edges
cnEntropy Pairwise Node Entropy
cnEntropyOrder Pairwise Node Entropy
cnFind Find Network by Complexity
cnFind-method Find Network by Complexity
cnFindAIC Find Network by AIC
cnFindAIC-method Find Network by AIC
cnFindBIC Find Network by BIC
cnFindBIC-method Find Network by BIC
cnFindKL Find Network by Complexity
cnFindKL-method Find Network by Complexity
cnJointProb Probability Calculations
cnJointProb-method Probability Calculations
cnKLComplexity Network Complexity
cnKLComplexity-method Network Complexity
cnLoglik Sample Log-likelihood
cnLoglik-method Sample Log-likelihood
cnMatEdges Network Edge Matrix
cnMatEdges-method Network Edge Matrix
cnMatParents Network Parent Matrix
cnMatParents-method Network Parent Matrix
cnNew New catNetwork
cnNodeLoglik Node Log-likelihood
cnNodeLoglik-method Node Log-likelihood
cnNodeMarginalProb Probability Calculations
cnNodeMarginalProb-method Probability Calculations
cnNodes Netwok Nodes
cnNodes-method Netwok Nodes
cnNodeSampleLoglik Node Log-likelihood
cnNodeSampleProb Node Log-likelihood
cnNumNodes Network Size
cnNumNodes-method Network Size
cnOrder Network Node Order
cnOrder-method Network Node Order
cnParents Network Parent Structure
cnParents-method Network Parent Structure
cnParHist Parenthood Histogram
cnParHist-method Parenthood Histogram
cnPearsonTest Goodness of Fit Test
cnPearsonTest-method Goodness of Fit Test
cnPlot Plot Network
cnPlot-method Plot Network
cnPlotProb Conditional Probability Structure
cnPlotProb-method Conditional Probability Structure
cnPredict Prediction
cnPredict-method Prediction
cnProb Conditional Probability Structure
cnProb-method Conditional Probability Structure
cnRandomCatnet Random Network
cnReorderNodes Reorder Network Nodes
cnReorderNodes-method Reorder Network Nodes
cnSamples Samples from Network
cnSamples-method Samples from Network
cnSearchHist Parent Histogram Matrix
cnSearchOrder Network Search for Given Node Order
cnSearchSA Stochastic Network Search
cnSetProb Set Probability from Data
cnSetProb-method Set Probability from Data
cnSetSeed Random Generator Seed
cnSubNetwork Sub-Network
cnSubNetwork-method Sub-Network
CPDAG Class CPDAG
CPDAG-class Class CPDAG
cvKfold Classification demonstration

-- D --

dag2cpdag Complete Network Representation
dag2cpdag-method Complete Network Representation
diabetes Classification demonstration
diabetesLoad Classification demonstration

-- I --

isDAG Check Direct Acyclic Graph (DAG) Condition

-- L --

lungLoad Classification demonstration

-- N --

novartis Novartis multi-tissue data