Compositional Analysis of Differentially Expressed Proteins in Cancer


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Documentation for package ‘canprot’ version 1.1.0

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canprot-package Compositional Analysis of Differentially Expressed Proteins
.pdat_multi Get Protein Expression Data
.pdat_osmotic Get Protein Expression Data
basis.text Calculate Compositional Metrics for Proteins
check_IDs Check UniProt IDs
cleanup Clean Up Data
CLES Common Language Effect Size
cplab Plot Compositional Differences
diffplot Plot Compositional Differences
get_comptab Calculate Compositional Differences
GRAVY Calculate Compositional Metrics for Proteins
H2OAA Calculate Compositional Metrics for Proteins
human Amino Acid Compositions of Human Proteins
human_aa Amino Acid Compositions of Human Proteins
human_additional Amino Acid Compositions of Human Proteins
human_base Amino Acid Compositions of Human Proteins
human_extra Amino Acid Compositions of Human Proteins
metrics Calculate Compositional Metrics for Proteins
mkvig Compile and View Vignettes from the Command Line
MWAA Calculate Compositional Metrics for Proteins
O2AA Calculate Compositional Metrics for Proteins
pdat_ Get Protein Expression Data
pdat_3D Get Protein Expression Data
pdat_breast Get Protein Expression Data
pdat_colorectal Get Protein Expression Data
pdat_glucose Get Protein Expression Data
pdat_hypoxia Get Protein Expression Data
pdat_liver Get Protein Expression Data
pdat_lung Get Protein Expression Data
pdat_osmotic_bact Get Protein Expression Data
pdat_osmotic_euk Get Protein Expression Data
pdat_osmotic_halo Get Protein Expression Data
pdat_pancreatic Get Protein Expression Data
pdat_prostate Get Protein Expression Data
pdat_secreted Get Protein Expression Data
pI Calculate Compositional Metrics for Proteins
protcomp Protein Compositions
PS Retrieve Phylostrata for Given UniProt IDs
qdist Quantile Distributions for One Dataset
uniprot_updates Amino Acid Compositions of Human Proteins
xsummary Summarize Compositional Differences
xsummary2 Summarize Compositional Differences
xsummary3 Summarize Compositional Differences
ZCAA Calculate Compositional Metrics for Proteins