msebmtcal.cmprsk {calibmsm} | R Documentation |
European Group for Blood and Marrow Transplantation data in competing risks format, for transitions out of the initial state only
Description
Used in vignette/article: Comparison-with-graphical-calibration-curves-in-competing-risks-setting.
Usage
msebmtcal.cmprsk
Format
'msebmtcal.cmprsk'
A data frame with 9,116 rows and 8 columns:
- id
Patient indentifier
- from
transition from state
- to
transition to state
- trans
transition number
- Tstart
time entered state 'from'
- Tstop
time leaving state 'from'
- time
time in state 'from'
- status
event indicator, 1:transitioned to state 'to'
Details
The ebmt4
data converted into msdata
format (see msprep
),
where all subsequent states are considered absorbing states. i.e. only transitions out of the initial state are considered,
meaning this data constitutes a competing risks model out of the initial state. Code for the derivation
of this dataset is provided in the source code for the package.
Source
This dataset was derived from data made available within the mstate
package, see ebmt4
.
The data was originally provided by the European Group for Blood and Marrow Transplantation (https://www.ebmt.org/).
We reiterate the source statement given by the developers of mstate
:
"We acknowledge the European Society for Blood and Marrow Transplantation (EBMT)
for making available these data. Disclaimer: these data were simplified for the
purpose of illustration of the analysis of competing risks and multi-state models
and do not reflect any real life situation. No clinical conclusions should be
drawn from these data."
References
EBMT (2023). “Data from the European Society for Blood and Marrow Transplantation.” URL https://search.r-project.org/CRAN/refmans/mstate/html/EBMT-data.html.
de Wreede LC, Fiocco M, Putter H (2011). “mstate: An R Package for the Analysis of Competing Risks and Multi-State Models.” Journal of Statistical Software, 38(7).