load.file {caRpools}R Documentation

Load sgRNA NGS Data especially for caRpools

Description

This function is a parser of read.table to load sgRNA NGS data into a data.frame

Usage

load.file(filename, header = TRUE, sep = "\t", comment.char="", type=NULL)

Arguments

filename

The filename of the NGS dataset file.

header

Specifies whether a header is present in the file or not.

sep

Specifies how data is separated column-wise. See ?read.table for further information.

comment.char

comment.char see ?read.table

type

Type of data being loaded. Bu default NULL, which loads tabular data. Other values: xlsx for MIACCS file and fastalib to read the library reference fasta file

Details

See ?read.table for further information.

Value

load.file returns a data.frame.

Note

none

Author(s)

Jan Winter

Examples

data(caRpools)
#data.frame = load.file("sgRNA.txt", header= TRUE, sep="\t")

[Package caRpools version 0.83 Index]