adjointSymb |
Compute adjoint equations of a function symbolically |

bvptwpC |
Interface to bvptwp() |

compileAndLoad |
Compile and load shared object implementing the ODE system. |

forcData |
Forcings data.frame |

funC |
Generate C code for a function and compile it |

getSymbols |
Get symbols from a character |

jacobianSymb |
Compute Jacobian of a function symbolically |

odeC |
Interface to ode() |

oxygenData |
Time-course data of O, O2 and O3 |

prodSymb |
Compute matrix product symbolically |

reduceSensitivities |
reduceSensitivities |

replaceNumbers |
Replace integer number in a character vector by other double |

replaceOperation |
Replace a binary operator in a string by a function |

replaceSymbols |
Replace symbols in a character vector by other symbols |

sensitivitiesSymb |
Compute sensitivity equations of a function symbolically |

setForcings |
Generate interpolation spline for the forcings and write into list of matrices |

sumSymb |
Compute matrix sumSymbolically |