test_df {bumbl}

Simulated colony growth data for internal tests

Description

Simulated data including two colonies (6 and 7) that should always cause errors for bumbl()

Usage

test_df

Format

An object of class tbl_df (inherits from tbl, data.frame) with 140 rows and 4 columns.

Details

Colonies 1-5 are generated with sim_colony() using the following parameters:

colony	tau	n0	lambda	delta
1	11.0	30	1.42	0.30
2	11.5	24	1.35	0.31
3	9.0	49	1.40	0.29
4	12.0	37	1.34	0.48
5	10.6	29	1.37	0.32

Colonies 6 and 7 are generated manually. Colony 6 contains negative numbers and should result in the warning "Warning, cannot find valid starting values: please specify some for colonyID '6' Omitting from results." Colony 7 has all the data pushed up to week 25 and therefore should result in a convergence error when searching for the optimal switchpoint and the warning, "Warning: search for optimal switchpoint did not converge for colonyID '6'. Omitting from results."