Biological Risk Assessment


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Documentation for package ‘briskaR’ version 1.0.2

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briskaR-package Biological Risk Assessment
briskaR Biological Risk Assessment
briskaRGetInternProjection Get the internal working projection PROJ.4
briskaRLoadInternProjection Load an internal working projection PROJ.4
briskaRSetInternProjection Load an internal working projection PROJ.4
brk_addFD Functional DATA
brk_addFD2 Functional DATA
brk_cFilterFD Function used to filter functional data in sf objects.
brk_cFilterFD2 Function used to filter functional data in sf objects.
brk_cFilterFD3 Function used to filter functional data in sf objects.
brk_cFilterFD_ Function used to filter functional data in sf objects.
brk_dispersal Compute dispersal
brk_emission Wrapper function brk_emission
brk_emission_landscape Wrapper function brk_emission
brk_exposure Compute exposure for a 'RasterStack' class object from package 'raster'
brk_exposureMatch Add raster value to element of sf object
brk_FDtoDF Convert list.column data.frame into scalar.column data.frame
brk_FDtoDF_ Convert list.column data.frame into scalar.column data.frame
brk_FDtoDF_STICK Convert list.column data.frame into scalar.column data.frame
brk_findIndexFD find index
brk_newPoints Simulate new points on a specific sf object
brk_rbindLStoDF Combine list of data.frame by Rows
brk_sampling Sampling based on distribution provided by Raster* object over a sf object
brk_survIT Functions for Toxicokinetic-Toxidynamic (TKTD) models
brk_survSD Functions for Toxicokinetic-Toxidynamic (TKTD) models
brk_timeline Add sequence to element of a sf object
brk_toxFun Functions for Toxicokinetic-Toxidynamic (TKTD) models
brk_toxFun_damage1 Functions for Toxicokinetic-Toxidynamic (TKTD) models
brk_toxFun_survival1 Functions for Toxicokinetic-Toxidynamic (TKTD) models
brk_toxFun_survival2 Functions for Toxicokinetic-Toxidynamic (TKTD) models
create.pollen.sources Pollen sources emission simulation
create_pollen_sources Pollen sources emission simulation
data_brk Data set included in the package
df_precipitation Data set included in the package
GetInternProjection Get the internal working projection PROJ.4
Hofmann_2009 Data set included in the package
is_square_sf Test if an sf is a square
LAMBERT_93 LAMBERT_93
Lang_2004 Data set included in the package
loadIndividuals Wrapper function loadIndividuals
loadLandscape Wrapper function : loadLandscape
loadLandscapeSIG Create a Landscape object from SIG shapefile file
loss_precipitation Loss precipitation function from a set of function implemented in earlier version of briskaR
maize.emitted_pollen Data set included in the package
maize.proportion_pollen Data set included in the package
maize_65 Data set included in the package
Precipitation Data set included in the package
saveIntoFile Save Particles Dispersion 3D Array to tiff file
sfMaize65 Data set included in the package
simul.precipitation Simulate precipitation between two dates
simulateIndividuals Wrapper function SimulateIndividuals
simulateInitialPartition simulateInitialPartition Method
simulateLandscape Simulate a new landscape
simulateThickMargins Simulate thick margin to a landscape
st_multibuffer Simulate thick margin to a landscape
st_squared_geometry Add squared frame polygon
temperatureGermany Data set included in the package
toxicIntensity toxicIntendity function wrapping dispersal and exposure
_PACKAGE Biological Risk Assessment