betta_pic {breakaway}

function for plotting total diversity

Description

A simple plotting interface for comparing total diversity across samples or a covariate gradient.

Usage

betta_pic(
  y,
  se,
  x = 1:length(y),
  ylimu = NULL,
  myy = NULL,
  mymain = NULL,
  mycol = NULL,
  labs = NULL,
  mypch = NULL,
  myxlim = NULL
)

Arguments

y

A vector of estimates of total diversity. Other parameter estimates are accessible; this method may be used for plotting any parameter estimates..

se

The standard errors in ‘⁠y⁠’, the diversity (or other parameter's) estimates.

x

A vector of covariates to form the x-coordinates of the intervals. If no argument is given, defaults to the order.

ylimu

The upper endpoint of the y-axis.

myy

Deprecated, for backwards compatibility

mymain

Deprecated, for backwards compatibility

mycol

Deprecated, for backwards compatibility

labs

Deprecated, for backwards compatibility

mypch

Deprecated, for backwards compatibility

myxlim

Deprecated, for backwards compatibility

Value

A ggplot object.

Author(s)

Amy Willis

References

Willis, A., Bunge, J., and Whitman, T. (2015). Inference for changes in biodiversity. arXiv preprint.

See Also

betta

Examples

betta_pic(c(1552, 1500, 884), c(305, 675, 205), mymain = "Example title")