little.ana.bc {bqtl} | R Documentation |
A simulated dataset
Description
A simulation of a BC1 cross of 150 organisms with a genome of around 500
cM consisting of 5 chromosomes. The format is that created by
make.analysis.obj
Details
This dataset is built up from several others. The basic data are:
- little.bc.pheno
A vector of phenotype data
- little.bc.markers
A
map.frame
of marker data and- little.dx
A data frame with 50 rows and 2 columns that specify the map locations of a simulated set of markers
These are used to construct
- little.mf.5
A
map.frame
with 'pseudo-markers' at least every 5 cM made fromlittle.mf.5 <- make.map.frame(little.map.frame, nint=marker.fill( little.map.frame, reso=5, TRUE ))
Then phenotype, covariate, and marker data are combined
with little.mf.5
- little.bc.pheno
A
data.frame
with the variablebc.phenotype
- little.bc.markers
A
data.frame
with marker state information
See Also
The examples in make.analysis.obj