bqtl-internal {bqtl}R Documentation

Internal BQTL functions

Description

Internal bqtl functions and objects

Usage

x %equiv% y
 map.dx(lambda, theta, min.lambda)
rhs.bqtl(reg.terms, ana.obj, bqtl.specials, local.covar, scope, 
    expand.specials = NULL, method, ...) 
zero.dup(x,dig=6)
uniq.config(swap.obj)

Arguments

lambda

(2*(recomb fraction-1/2)

theta

recomb fraction

min.lambda

smallest map distance to use

reg.terms

a formula

ana.obj

an analysis.object

bqtl.specials

a vector of acceptable special names

local.covar

a function

scope

vector of strings

expand.specials

logical,whether to use expand.grid on the loci

method

e'g' "F2", "BC!", etc

...

not sure

swap.obj

result of swap

x

numeric vector or matrix

y

numeric vector or matrix

dig

how many significant digits to use

Details

These are not to be called by the user.


[Package bqtl version 1.0-33 Index]