network.stability.output {bootcluster} | R Documentation |
Plot method for objests from threshold.select
Description
Plot method for objests from threshold.select
Usage
network.stability.output(input, optimal.only = FALSE)
Arguments
input |
a |
optimal.only |
a |
Details
network.stability.output
is used to generate a series of network plots based on the given threshold.seq
,where the nodes are
colored by the level of stability. The network with optimal
threshold value selected by function threshold.select
is colored as red.
Value
Plot of network figures
Author(s)
Mingmei Tian
References
A framework for stability-based module detection in correlation graphs. Mingmei Tian,Rachael Hageman Blair,Lina Mu, Matthew Bonner, Richard Browne and Han Yu.
Examples
set.seed(1)
data(wine)
x0 <- wine[1:50,]
mytest<-threshold.select(data.input=x0,threshold.seq=seq(0.1,0.5,by=0.05), B=20,
cor.method='pearson',large.size=0,
PermuNo = 10,
no_cores=1,
scheme_2 = FALSE)
network.stability.output(mytest)
[Package bootcluster version 0.3.2 Index]