network.stability.output {bootcluster} | R Documentation |
Plot method for objests from threshold.select
network.stability.output(input, optimal.only = FALSE)
input |
a |
optimal.only |
a |
network.stability.output
is used to generate a series of network plots based on the given threshold.seq
,where the nodes are
colored by the level of stability. The network with optimal
threshold value selected by function threshold.select
is colored as red.
Plot of network figures
Mingmei Tian
A framework for stability-based module detection in correlation graphs. Mingmei Tian,Rachael Hageman Blair,Lina Mu, Matthew Bonner, Richard Browne and Han Yu.
set.seed(1) data(wine) x0 <- wine[1:50,] mytest<-threshold.select(data.input=x0,threshold.seq=seq(0.1,0.5,by=0.05), B=20, cor.method='pearson',large.size=0, PermuNo = 10, no_cores=1, scheme_2 = FALSE) network.stability.output(mytest)