adjustMixedDir |
Adjusting the PDAG matrix to model constraints This function can be used to adjust the adjacency matrix to model constraints, such as blacklist and background nodes |

annotateEdges |
Annotating edges from discovered networks |

blInit |
Initializing blacklist |

blUpdate |
Updating blacklist |

bnclustNetworks |
Deriving consensus networks based on posterior probabilities of mixture model |

bnclustOmics |
Bayesian network based clustering of multi-omics data |

bnInfo |
Constructing object of class bnInfo |

bnres2 |
bnres2 |

bnres3 |
bnres3 |

bnres4 |
bnres3 |

checkmembership |
Comparing estimated and ground truth membership |

chooseK |
Choosing the number of clusters |

clustDBN |
DBN-based clustering |

clusters |
Extracting cluster memberships |

dags |
Extracting edge posterior probabilities |

getModels |
Deriving consensus graphs |

mappings |
mappings |

penInit |
Initializing penalization matrix |

penUpdateInter |
Updating penalization matrix (between two omics types) |

penUpdateIntra |
Updating penalization matrix (intra one omics type) |

plotNode |
Plotting all connections of one node |

posteriors |
Extracting edge posterior probabilities |

relabelSimulation |
Relabeling clusters |

simclusters |
simclusters |

simdags |
simdags |

simdata |
simdata |

simint |
simint |

stringint |
stringint |

toydata |
toydata |