engtotals {bmstdr}

Total number of weekly Covid-19 deaths and cases in the 313 local Local Authority Districts, Counties and Unitary Authorities (LADCUA) in England during the first peak from March 13 to July 31, 2020.

Description

Total number of weekly Covid-19 deaths and cases in the 313 local Local Authority Districts, Counties and Unitary Authorities (LADCUA) in England during the first peak from March 13 to July 31, 2020.

Usage

engtotals

Format

An object of class data.frame with 313 rows and 19 columns.

Source

Sahu and Böhning (2021). @format A data frame with 313 rows and 19 columns:

Areacode

Areacode identifier of the 313 Local Authority Districts, Counties and Unitary Authorities (LADCUA)

mapid

A numeric column identifying the map area needed for plotting

spaceid

A numeric variable taking value 1 to 313 identifying the LADCUA's

Region

Identifies one of the 9 English regions

popn

Population number in mid-2019

jsa

Percentage of the working age population receiving job-seekers allowance during January 2020

houseprice

Median house price in March 2020

popdensity

Population density in mid-2019

startdate

Start date of the week

Weeknumber

Week numbers 11 to 30

no2

Estimated average value of NO2 at the centroid of the LADCUA in that week

covid

Number of Covid-19 deaths within 28 days of a positive test

allcause

Total number deaths

noofcases

Total number of cases

Edeaths

Expected number of Covid-19 deaths. See Sahu and Bohning (2021) for methodology.

Ecases

Expected number of cases.

logEdeaths

Log of the column Edeaths

logEcases

Log of the column Ecases

casesmr

Standaridised morbidity rate for the number of cases, noofcases/Ecases

nweek

Number of weeks during March 13 to July 31, 2020. All values are 20.

noofhighweeks

Number of weeks out of 20 when the casesmr was greater than 1

References

Sahu SK, Böhning D (2021). “Bayesian spatio-temporal joint disease mapping of Covid-19 cases and deaths in local authorities of England.” Spatial Statistics. doi:10.1016/j.spasta.2021.100519.

Examples

 colnames(engtotals)
 dim(engtotals)
 summary(engtotals[, 5:14])