clu {blockmodeling} | R Documentation |
Functions for extraction of partition (clu
), all best partitions (partitions
),
image or blockmodel (IM
)) and total error or inconsistency (err
) for objects,
returned by functions critFunC
or optRandomParC
.
clu(res, which = 1, ...)
partitions(res)
err(res, ...)
IM(res, which = 1, drop = TRUE, ...)
EM(res, which = 1, drop = TRUE, ...)
res |
Result of function |
which |
From |
... |
Not used. |
drop |
If |
The desired element.
Aleš Žiberna
Doreian, P., Batagelj, V., & Ferligoj, A. (2005). Generalized blockmodeling, (Structural analysis in the social sciences, 25). Cambridge [etc.]: Cambridge University Press.
Žiberna, A. (2007). Generalized Blockmodeling of Valued Networks. Social Networks, 29(1), 105-126. doi: 10.1016/j.socnet.2006.04.002
Žiberna, A. (2008). Direct and indirect approaches to blockmodeling of valued networks in terms of regular equivalence. Journal of Mathematical Sociology, 32(1), 57-84. doi: 10.1080/00222500701790207
critFunC
, plot.mat
, optRandomParC
n <- 8 # If larger, the number of partitions increases dramatically,
# as does if we increase the number of clusters
net <- matrix(NA, ncol = n, nrow = n)
clu <- rep(1:2, times = c(3, 5))
tclu <- table(clu)
net[clu == 1, clu == 1] <- rnorm(n = tclu[1] * tclu[1], mean = 0, sd = 1)
net[clu == 1, clu == 2] <- rnorm(n = tclu[1] * tclu[2], mean = 4, sd = 1)
net[clu == 2, clu == 1] <- rnorm(n = tclu[2] * tclu[1], mean = 0, sd = 1)
net[clu == 2, clu == 2] <- rnorm(n = tclu[2] * tclu[2], mean = 0, sd = 1)
# We select a random partition and then optimize it
all.par <- nkpartitions(n = n, k = length(tclu))
# Forming the partitions
all.par <- lapply(apply(all.par, 1, list),function(x) x[[1]])
# to make a list out of the matrix
res <- optParC(M = net,
clu = all.par[[sample(1:length(all.par), size = 1)]],
approaches = "hom", homFun = "ss", blocks = "com")
plot(res) # Hopefully we get the original partition
clu(res) # Hopefully we get the original partition
err(res) # Error
IM(res) # Image matrix/array.
EM(res) # Error matrix/array.