Bayesian Inference with Laplace Approximations and P-Splines


[Up] [Top]

Documentation for package ‘blapsr’ version 0.5.5

Help Pages

amlps Bayesian additive partial linear modeling with Laplace-P-splines.
amlps.object Object resulting from the fit of an additive partial linear model.
coxlps Fit a Cox proportional hazards regression model with Laplace-P-splines.
coxlps.baseline Extract estimated baseline quantities from a fit with coxlps.
coxlps.object Object from a Cox proportional hazards fit with Laplace-P-splines.
cubicbs Construct a cubic B-spline basis.
curelps Promotion time cure model with Laplace P-splines.
curelps.extract Extract estimates of survival functions and cure probability for the promotion time cure model.
curelps.object Object from a promotion time model fit with Laplace-P-splines.
ecog1684 Phase III Melanoma clinical trial.
gamlps Bayesian generalized additive modeling with Laplace-P-splines.
gamlps.object Object resulting from the fit of a generalized additive model.
kidneytran Survival data of kidney transplant patients.
laryngeal Survival data of male laryngeal cancer patients.
medicaid Data from the 1986 Medicaid Consumer Survey.
melanoma Melanoma survival data.
penaltyplot Plot the approximate posterior distribution of the penalty vector.
plot.amlps Plot smooth functions of an additive model object.
plot.coxlps Plot baseline hazard and survival curves from a coxlps object.
plot.curelps Plot estimated survival functions and cure probability for the promotion time cure model.
plot.gamlps Plot smooth functions of a generalized additive model object.
print.amlps Print an additive partial linear model object.
print.coxlps Print a coxlps object.
print.curelps Print the fit of a promotion time cure model.
print.gamlps Print a generalized additive model object.
simcuredata Simulation of survival times for the promotion time cure model.
simgamdata Simulation of data for (Generalized) additive models.
simsurvdata Simulation of right censored survival times for the Cox model.
snmatch Fit a skew-normal distribution to a target density.