BIOMOD.options.default {biomod2}

bm_ModelingOptions output object class

Description

Class returned by bm_ModelingOptions (a list of BIOMOD.options.dataset more exactly), and used by BIOMOD_Modeling

Usage

## S4 method for signature 'character,character'
BIOMOD.options.default(mod, typ, pkg, fun)

Arguments

mod

a character corresponding to the model name to be computed, must be either ANN, CTA, FDA, GAM, GBM, GLM, MARS, MAXENT, MAXNET, RF, SRE, XGBOOST

typ

a character corresponding to the data type to be used, must be either binary, binary.PA, abundance, compositional

pkg

a character corresponding to the package containing the model function to be called

fun

a character corresponding to the model function name to be called

Slots

model

a character corresponding to the model

type

a character corresponding to the data type (binary, binary.PA, abundance, compositional)

package

a character corresponding to the package containing the model function to be called

func

a character corresponding to the model function name to be called

args.names

a vector containing character corresponding to the model function arguments

args.default

a list containing for each dataset the default values for all arguments listed in args.names

Author(s)

Maya Gueguen

See Also

BIOMOD.options.dataset, bm_ModelingOptions, bm_Tuning, BIOMOD_Modeling, bm_RunModelsLoop

Other Toolbox objects: BIOMOD.ensemble.models.out, BIOMOD.formated.data, BIOMOD.formated.data.PA, BIOMOD.models.options, BIOMOD.models.out, BIOMOD.options.dataset, BIOMOD.projection.out, BIOMOD.stored.data, biomod2_ensemble_model, biomod2_model

Examples

showClass("BIOMOD.options.default")