show_guess_primary {biogrowth} R Documentation

## Plot of the initial guess for growth under constant environmental conditions

### Description

Compares the prediction corresponding to a guess of the parameters of the primary model against experimental data

### Usage

show_guess_primary(
fit_data,
model_name,
guess,
logbase_mu = 10,
formula = logN ~ time
)


### Arguments

 fit_data Tibble (or data.frame) of data for the fit. It must have two columns, one with the elapsed time (time by default) and another one with the decimal logarithm of the populatoin size (logN by default). Different column names can be defined using the formula argument. model_name Character defining the primary growth model as per primary_model_data() guess Named vector with the initial guess of the model parameters logbase_mu Base of the logarithm the growth rate is referred to. By default, 10 (i.e. log10). See vignette about units for details. formula an object of class "formula" describing the x and y variables. logN ~ time as a default.

### Value

A ggplot() comparing the model prediction against the data

[Package biogrowth version 1.0.1 Index]