Create and Manipulate BioCompute Objects


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Documentation for package ‘biocompute’ version 1.1.0

Help Pages

compose Compose BioCompute Object (v1.4.2)
compose_description Compose BioCompute Object - Description Domain (v1.4.2)
compose_description_v1.4.2 Compose BioCompute Object - Description Domain (v1.4.2)
compose_error Compose BioCompute Object - Error Domain (v1.4.2)
compose_error_v1.4.2 Compose BioCompute Object - Error Domain (v1.4.2)
compose_execution Compose BioCompute Object - Execution Domain (v1.4.2)
compose_execution_v1.4.2 Compose BioCompute Object - Execution Domain (v1.4.2)
compose_extension Compose BioCompute Object - Extension Domain (v1.4.2)
compose_extension_v1.4.2 Compose BioCompute Object - Extension Domain (v1.4.2)
compose_fhir Compose BioCompute Object - FHIR Extension (v1.4.2)
compose_fhir_v1.4.2 Compose BioCompute Object - FHIR Extension (v1.4.2)
compose_io Compose BioCompute Object - Input and Output Domain (v1.4.2)
compose_io_v1.4.2 Compose BioCompute Object - Input and Output Domain (v1.4.2)
compose_parametric Compose BioCompute Object - Parametric Domain (v1.4.2)
compose_parametric_v1.4.2 Compose BioCompute Object - Parametric Domain (v1.4.2)
compose_provenance Compose BioCompute Object - Provenance Domain (v1.4.2)
compose_provenance_v1.4.2 Compose BioCompute Object - Provenance Domain (v1.4.2)
compose_scm Compose BioCompute Object - SCM Extension (v1.4.2)
compose_scm_v1.4.2 Compose BioCompute Object - SCM Extension (v1.4.2)
compose_tlf Compose BioCompute Object - Top Level Fields (v1.4.2)
compose_tlf_v1.4.2 Compose BioCompute Object - Top Level Fields (v1.4.2)
compose_usability Compose BioCompute Object - Usability Domain (v1.4.2)
compose_usability_v1.4.2 Compose BioCompute Object - Usability Domain (v1.4.2)
compose_v1.4.2 Compose BioCompute Object (v1.4.2)
convert_json Convert BioCompute Object or domain to JSON string
convert_yaml Convert BioCompute Object or domain to YAML string
export_html Export BioCompute Object as HTML
export_json Export BioCompute Object as JSON
export_pdf Export BioCompute Object as PDF
export_sevenbridges Export BioCompute Object to Seven Bridges Platforms
export_word Export BioCompute Object as Word document
generate_example Generate example BioCompute Objects
generate_id Generate ID for the BioCompute Object
is_bco Is this a BCO object?
is_domain Is this a domain object?
read_bco Parse Biocompute Object From JSON File to R Object
validate_checksum BioCompute Objects checksum validator (v1.4.2)
validate_checksum_v1.4.2 BioCompute Objects checksum validator (v1.4.2)
validate_schema BioCompute Objects schema validator (v1.4.2)
validate_schema_v1.4.2 BioCompute Objects schema validator (v1.4.2)
versions BioCompute Object specification versions