sequence {bigQF} R Documentation

## Simulated human DNA variant sequence

### Description

A matrix with number of copies of the minor allele for 4028 variants on 5000 people, simulated using the Markov Coalescent Simulator of Chen and coworkers.

### Usage

data("sequence")

### Format

The format is: num [1:5000, 1:4028] 0 0 0 0 0 0 0 0 0 0 ...

### References

Gary K Chen, Paul Marjoram, and Jeffrey D. Wall (2009) Fast and flexible simulation of DNA sequence data Genome Research 19:136-142. http://genome.cshlp.org/content/19/1/136

### Examples

data(sequence)
summary(colMeans(sequence))


[Package bigQF version 1.6 Index]