bdm.boxp |
Clustering statistics box-plot. |
bdm.cost |
ptSNE cost & size plot. |
bdm.dMap |
Class density maps |
bdm.dMap.plot |
Class density maps plot. |
bdm.example |
Example dataset |
bdm.fName |
Default <bdm> file name |
bdm.init |
Create <bdm> instance |
bdm.labels |
Get data-point clustering labels. |
bdm.local |
Set/get default local machine name or IP address |
bdm.merge.s2nr |
Merging of clusters based on signal-to-noise-ratio. |
bdm.mybdm |
Set/get default path for <mybdm> |
bdm.optk.plot |
Plots the signal-to-nois-ratio as a function of the number of clusters. |
bdm.optk.s2nr |
Find optimal number of clusters based on signal-to-noise-ratio. |
bdm.pakde |
Perplexity-adaptive kernel density estimation |
bdm.pakde.plot |
Plot paKDE (density landscape) |
bdm.ptsne |
Parallelized t-SNE |
bdm.ptsne.plot |
Plot ptSNE (low-dimensional embedding) |
bdm.qMap |
ptSNE quantile-maps |
bdm.save |
Save <bdm> instance |
bdm.scp |
Transfer <bdm> instance to a remote machine. |
bdm.wtt |
Watertrack transform (WTT) |
bdm.wtt.plot |
Plot WTT (clustering) |