Taxonomic Uncertainty on Multivariate Analyses of Ecological Data

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Documentation for package ‘betaper’ version 1.1-2

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adonis_pertables Function to assess the efects of taxonomic uncertainty on permutational multivariate analysis of variance using distance matrices
Amazonia Tree abundance and soil data in Western Amazonia
cca_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Constrained Correspondence Analysis
HCP Tree counts in tropical montane forest fragments
HCP.coords Tree counts in tropical montane forest fragments
mantel_pertables Function to assess the efects of taxonomic uncertainty on Mantel tests
pertables Function to incorporate the effect of taxonomic uncertainty on multivariate analyses of ecological data.
pertables.p2 Function to incorporate the effect of taxonomic uncertainty on multivariate analyses of ecological data.
plot.adonis_pertables Function to assess the efects of taxonomic uncertainty on permutational multivariate analysis of variance using distance matrices
plot.cca_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Constrained Correspondence Analysis
plot.mantel_pertables Function to assess the efects of taxonomic uncertainty on Mantel tests
plot.rda_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Redundance Analysis
print.adonis_pertables Function to assess the efects of taxonomic uncertainty on permutational multivariate analysis of variance using distance matrices
print.cca_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Constrained Correspondence Analysis
print.mantel_pertables Function to assess the efects of taxonomic uncertainty on Mantel tests
print.pertables Function to incorporate the effect of taxonomic uncertainty on multivariate analyses of ecological data.
print.rda_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Redundance Analysis
rda_pertables Function to assess the efects of taxonomic uncertainty on [Partial] Redundance Analysis
soils Tree abundance and soil data in Western Amazonia