rnd_phylo_to_xml_init {beautier} | R Documentation |
Creates the XML of a random phylogeny,
as used in the init
section
Description
Creates the XML text for the beast
tag of a BEAST2 parameter file,
which is directly after the XML
declaration (created by create_xml_declaration.
Usage
rnd_phylo_to_xml_init(inference_model)
Arguments
inference_model |
a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model. |
Details
The init
tag has these elements:
<init id=\"RandomTree.t:[...]> <populationModel[...]> [...] </populationModel> </init>
Value
the phylogeny as XML text
Author(s)
Richèl J.C. Bilderbeek
[Package beautier version 2.6.12 Index]