create_uniform_distr {beautier}

Create a uniform distribution

Description

Create a uniform distribution

Usage

create_uniform_distr(id = NA, value = NA, lower = NA, upper = Inf)

Arguments

id

the distribution's ID

value

the initial value for the MCMC

lower

the lower bound, the lowest possible value

upper

an upper limit of the uniform distribution. If the upper limits needs to be infinity, set upper to Inf.

Value

a uniform distribution

Author(s)

Richèl J.C. Bilderbeek

See Also

the function create_distr shows an overview of all supported distributions

Examples

if (is_on_ci()) {

  uniform_distr <- create_uniform_distr()

  beast2_input_file <- get_beautier_tempfilename()
  create_beast2_input_file(
    input_filename = get_fasta_filename(),
    beast2_input_file,
    tree_prior = create_yule_tree_prior(
      birth_rate_distr = uniform_distr
    )
  )
  file.remove(beast2_input_file)

  remove_beautier_folder()
}