create_poisson_distr {beautier}R Documentation

Create a Poisson distribution

Description

Create a Poisson distribution

Usage

create_poisson_distr(id = NA, lambda = 0, value = NA, lower = NA, upper = NA)

Arguments

id

the distribution's ID

lambda

the lambda parameter, a numeric value. For advanced usage, use the structure as returned by create_lambda_param

value

the initial value for the MCMC

lower

the lower bound, the lowest possible value

upper

an upper limit of the uniform distribution. If the upper limits needs to be infinity, set upper to Inf.

Value

a Poisson distribution

Author(s)

Richèl J.C. Bilderbeek

See Also

the function create_distr shows an overview of all supported distributions

Examples

if (is_on_ci()) {

  poisson_distr <- create_poisson_distr()

  beast2_input_file <- get_beautier_tempfilename()
  create_beast2_input_file(
    input_filename = get_fasta_filename(),
    beast2_input_file,
    tree_prior = create_yule_tree_prior(
      birth_rate_distr = poisson_distr
    )
  )
  file.remove(beast2_input_file)

  remove_beautier_folder()
}

[Package beautier version 2.6.11 Index]