create_ns_inference_model {beautier} | R Documentation |
Create an inference model to measure the evidence of.
Description
Create an inference model to measure the evidence of. To do so, the inference model is created as usual (see create_inference_model), except for using a Nested Sampling MCMC (see create_ns_mcmc)
Usage
create_ns_inference_model(
site_model = create_jc69_site_model(),
clock_model = create_strict_clock_model(),
tree_prior = create_yule_tree_prior(),
mcmc = create_ns_mcmc()
)
Arguments
site_model |
a site model,
as returned by |
clock_model |
a clock model,
as returned by |
tree_prior |
a tree priors,
as returned by |
mcmc |
one MCMC.
Use |
Value
an inference model
Author(s)
Richèl J.C. Bilderbeek
See Also
Use create_inference_model to create a regular inference model. Use create_test_ns_inference_model to create an inference model to estimate the marginal likelihood with a short MCMC, to be used in testing.
Examples
check_empty_beautier_folder()
inference_model <- create_ns_inference_model()
check_empty_beautier_folder()