create_beast2_input_init {beautier} | R Documentation |
Creates the init
section of a BEAST2 XML parameter file
Description
Creates the init
section of a BEAST2 XML parameter file
Usage
create_beast2_input_init(inference_model)
Arguments
inference_model |
a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model. |
Value
lines of XML text
Author(s)
Richèl J.C. Bilderbeek
Examples
check_empty_beautier_folder()
inference_model <- init_inference_model(
input_filename = get_fasta_filename(),
inference_model = create_test_inference_model()
)
xml <- create_beast2_input_init(
inference_model = inference_model
)
check_empty_beautier_folder()
[Package beautier version 2.6.12 Index]