create_beast2_input_distr_prior {beautier} | R Documentation |
Creates the prior section in the distribution section of a BEAST2 XML parameter file
Description
Creates the prior section in the distribution section of a BEAST2 XML parameter file
Usage
create_beast2_input_distr_prior(inference_model)
Arguments
inference_model |
a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model. |
Value
lines of XML text
Note
this function is not intended for regular use, thus its long name length is accepted
Author(s)
Richèl J.C. Bilderbeek
See Also
this function is called by create_beast2_input_distr
,
together with create_beast2_input_distr_lh
Examples
check_empty_beautier_folder()
# <distribution id="posterior" spec="util.CompoundDistribution">
# <distribution id="prior" spec="util.CompoundDistribution">
# HERE, where the ID of the distribution is 'prior'
# </distribution>
# <distribution id="likelihood" ...>
# </distribution>
# </distribution>
check_empty_beautier_folder()
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