ccp_tree_prior_to_xml_state {beautier} | R Documentation |
state
sectionConvert a CCP tree prior
to the XML as part of the state
section
ccp_tree_prior_to_xml_state(inference_model)
inference_model |
a Bayesian phylogenetic inference model. An inference model is the complete model setup in which a site model, clock model, tree prior and more are specified. Use create_inference_model to create an inference model. Use check_inference_model to check if an inference model is valid. Use rename_inference_model_filenames to rename the files in an inference model. |
XML as text
check_empty_beautier_folder()
# Need an ID and inital value
inference_model <- create_inference_model(
tree_prior = create_ccp_tree_prior(
id = "anthus_nd2_sub",
pop_size_distr = create_normal_distr(
id = 123,
value = 3.14
)
)
)
ccp_tree_prior_to_xml_state(inference_model)
check_empty_beautier_folder()