are_beast2_input_lines_deep {beastier}R Documentation

Would these lines of text, when written to a file, result in a valid BEAST2 input file?

Description

Would these lines of text, when written to a file, result in a valid BEAST2 input file?

Usage

are_beast2_input_lines_deep(
  lines,
  verbose = FALSE,
  beast2_path = get_default_beast2_path()
)

Arguments

lines

lines of text

verbose

if TRUE, additional information is displayed, that is potentially useful in debugging

beast2_path

name of either a BEAST2 binary file (usually simply beast) or a BEAST2 jar file (usually has a .jar extension). Use get_default_beast2_bin_path to get the default BEAST binary file's path Use get_default_beast2_jar_path to get the default BEAST jar file's path

Value

TRUE if the text is valid, FALSE if not

Author(s)

Richèl J.C. Bilderbeek

See Also

Use is_beast2_input_file to check a file

Examples

if (is_beast2_installed() && is_on_ci()) {
  beast2_filename <- get_beastier_path("anthus_2_4.xml")
  text <- readLines(beast2_filename)
  are_beast2_input_lines_deep(text)
}

[Package beastier version 2.4.8 Index]