Biodiversity Data Cleaning

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Documentation for package ‘bdc’ version 1.1.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bdc_basisOfRecords_notStandard	Identify records from doubtful source (e.g., 'fossil', MachineObservation')
bdc_clean_names	Clean and parse scientific names
bdc_coordinates_country_inconsistent	Identify records within a reference country
bdc_coordinates_empty	Identify records with empty geographic coordinates
bdc_coordinates_from_locality	Identify records lacking or with invalid coordinates but containing locality information
bdc_coordinates_outOfRange	Identify records with out-of-range geographic coordinates
bdc_coordinates_precision	Flag low-precise geographic coordinates
bdc_coordinates_transposed	Identify transposed geographic coordinates
bdc_country_from_coordinates	Get country names from coordinates
bdc_country_standardized	Standardizes country names and gets country code
bdc_create_figures	Create figures reporting the results of the bdc package
bdc_create_report	Create a report summarizing the results of data quality tests
bdc_eventDate_empty	Identify records with empty event date
bdc_filter_out_flags	Remove columns with the results of data quality tests
bdc_filter_out_names	Filter out records according to their taxonomic status
bdc_query_names_taxadb	Harmonizing taxon names against local stored taxonomic databases
bdc_quickmap	Create a map of points using ggplot2
bdc_scientificName_empty	Identify records with empty scientific names
bdc_standardize_datasets	Standardize datasets columns based on metadata
bdc_summary_col	Create or update the column summarizing the results of data quality tests
bdc_year_from_eventDate	Extract year from eventDate
bdc_year_outOfRange	Identify records with year out-of-range