plot.bayesnecfit {bayesnec} R Documentation

## plot.bayesnecfit

### Description

Generates a plot of a fitted bayesnecfit model, as returned by bnec.

### Usage

## S3 method for class 'bayesnecfit'
plot(
x,
...,
CI = TRUE,
position_legend = "topright",
xform = NA,
lxform = NA,
force_x = FALSE,
jitter_x = FALSE,
jitter_y = FALSE,
ylab = "Response",
xlab = "Predictor",
xticks = NA
)


### Arguments

 x An object of class bayesnecfit as returned by bnec. ... Additional arguments to plot. CI A logical value indicating if credibility intervals on the model fit should be plotted, calculated as the upper and lower bounds of the individual predicted values from all posterior samples. add_nec A logical value indicating if the estimated NEC value and 95% credible intervals should be added to the plot. position_legend A numeric vector indicating the location of the NEC or EC10 legend, as per a call to legend. add_ec10 A logical value indicating if an estimated EC10 value and 95% credible intervals should be added to the plot. xform A function to be applied as a transformation of the x data. lxform A function to be applied as a transformation only to axis labels and the annotated NEC / EC10 values. force_x A logical value indicating if the argument xform should be forced on the predictor values. This is useful when the user transforms the predictor beforehand (e.g. when using a non-standard base function). jitter_x A logical value indicating if the x data points on the plot should be jittered. jitter_y A logical value indicating if the y data points on the plot should be jittered. ylab A character vector to use for the y-axis label. xlab A character vector to use for the x-axis label. xticks A numeric vector indicate where to place the tick marks of the x-axis.

### Value

a plot of the fitted model

[Package bayesnec version 2.0.2.5 Index]