get.regtfr.prediction {bayesTFR}R Documentation

Accessing Subnational Prediction Objects

Description

Retrieve subnational (regional) prediction results produced by tfr.predict.subnat, either for one country or for all available countries.

Usage

get.regtfr.prediction(sim.dir, country = NULL)

Arguments

sim.dir

Simulation directory of the subnational predictions. It corresponds to the argument output.dir in tfr.predict.subnat.

country

Numerical country code. If it is not given, all available subnational predictions are retrieved.

Details

Predictions for country x are assumed to be stored in “sim.dir/subnat/cx”.

Value

If argument country is given, the function returns an object of class bayesTFR.prediction. If it is NULL, it returns a list of such objects. Names of the list items are the country codes.

See Also

tfr.predict.subnat

Examples

# Subnational example data
my.subtfr.file <- file.path(find.package("bayesTFR"), 'extdata', 'subnational_tfr_template.txt')
subtfr <- read.delim(my.subtfr.file, check.names=FALSE, stringsAsFactor=FALSE)
countries <- unique(subtfr[, c("country_code", "country")])

# Directory with national projections (contains 30 trajectories for each country)
nat.dir <- file.path(find.package("bayesTFR"), "ex-data", "bayesTFR.output")

# Subnational projections for all three countries ()
subnat.dir <- tempfile()
tfr.predict.subnat(countries$country_code, my.tfr.file=my.subtfr.file,
    sim.dir=nat.dir, output.dir=subnat.dir, start.year=2013)
    
# Retrieve results for all countries
preds <- get.regtfr.prediction(subnat.dir)
names(preds)

# View tables of subregions for each country
for(i in 1:nrow(countries)) {
  cat("\n\n", countries$country[i], "\n")
  print(get.countries.table(preds[[as.character(countries$country_code[i])]]))
}
# Quantiles for individual subregions
tfr.trajectories.table(preds[["218"]], "Bolivar")

# Retrieve results for one country
pred <- get.regtfr.prediction(subnat.dir, 218)
tfr.trajectories.plot(pred, "Loja")

# cleanup
unlink(subnat.dir)

# See more examples in ?tfr.predict.subnat

[Package bayesTFR version 7.0-5 Index]