mig.partraces.plot {bayesMig} | R Documentation |
Plotting MCMC Parameter Traces
Description
Functions for plotting the MCMC parameter traces from the migration model.
Usage
mig.partraces.plot(
mcmc.list = NULL,
sim.dir = NULL,
chain.ids = NULL,
par.names = mig.parameter.names(),
nr.points = NULL,
dev.ncol = 2,
...
)
mig.partraces.cs.plot(
country,
mcmc.list = NULL,
sim.dir = NULL,
chain.ids = NULL,
par.names = mig.parameter.names.cs(),
nr.points = NULL,
dev.ncol = 3,
...
)
Arguments
mcmc.list |
List of |
sim.dir |
Directory with the MCMC simulation results. It is only used if |
chain.ids |
List of MCMC identifiers to be plotted. If it is |
par.names |
Names of parameters for which traces should be plotted. By default all
country-independent parameters are plotted if used within |
nr.points |
Number of points to be plotted. If |
dev.ncol |
Number of column for the graphics device. If the number of parameters is smaller
than |
... |
Additional graphical parameters. |
country |
Name or numerical code of a country. It can also be given as ISO-2 or ISO-3 characters. |
Details
The functions plot MCMC traces either for country-independent parameters
(mig.partraces.plot
or for country-specific parameters (mig.partraces.cs.plot
,
one graph per parameter. One can restrict it to specific chains by setting
the chain.ids
argument, and to specific parameters by setting the par.names
argument.
Value
No return value.