get.mig.mcmc {bayesMig} | R Documentation |
Access MCMC results
Description
Function get.mig.mcmc
retrieves results of an MCMC simulation and creates an object of class
bayesMig.mcmc.set
. Function has.mig.mcmc
checks the existence of such results.
Usage
get.mig.mcmc(
sim.dir,
chain.ids = NULL,
low.memory = TRUE,
burnin = 0,
verbose = FALSE
)
has.mig.mcmc(sim.dir)
Arguments
sim.dir |
Directory where simulation results are stored. |
chain.ids |
Chain identifiers in case only specific chains should be included in the resulting object. By default, all available chains are included. |
low.memory |
Logical. If |
burnin |
Burn-in used for loading traces. Only relevant, if |
verbose |
Logical value. Switches log messages on and off. |
Value
get.mig.mcmc
returns an object of class bayesMig.mcmc.set
.
has.mig.mcmc
returns a logical value indicating if a migration simulation
exists in the given directory.
See Also
Examples
# Toy simulation
sim.dir <- tempfile()
m <- run.mig.mcmc(nr.chains = 1, iter = 10, output.dir = sim.dir)
# can be later accessed via
m <- get.mig.mcmc(sim.dir)
summary(m)
has.mig.mcmc(sim.dir) # should be TRUE
unlink(sim.dir, recursive = TRUE)
[Package bayesMig version 0.4-6 Index]