insert_bugfile_chunk_reg_nest_meas {baker}

Insert measurement likelihood (nested model+regression) code chunks into .bug model file

Description

Insert measurement likelihood (nested model+regression) code chunks into .bug model file

Usage

insert_bugfile_chunk_reg_nest_meas(
  Mobs,
  prior,
  cause_list,
  FPR_formula,
  use_measurements = "BrS",
  ppd = NULL,
  use_jags = FALSE
)

Arguments

Mobs

Measurement data in the form of data_nplcm

prior

Prior specification from model_options

cause_list

A list of latent status names (crucial for building templates; see make_template())

FPR_formula

A list of FPR regression formula; check model_options$likelihood$FPR_formula

use_measurements

"BrS", or "SS"

ppd

Default is NULL; set to TRUE for posterior predictive checking

use_jags

Default is FALSE; set to TRUE if want to use JAGS for model fitting.

Value

A long character string to be inserted into .bug model file as measurement likelihood

See Also

Called by write_model_Reg_NoNest for constructing a .bug file. This is usually called along with specification of latent status regression (insert_bugfile_chunk_reg_etiology).