parse_beast2_output {babette} | R Documentation |
Process the 'BEAST2' output dependent on 'BEAST2' package specifics
Description
Process the 'BEAST2' output dependent on 'BEAST2' package specifics
Usage
parse_beast2_output(out, inference_model)
Arguments
out |
a list with the complete babette output, with elements:
|
inference_model |
a Bayesian phylogenetic inference model, as returned by create_inference_model |
Value
complete babette output with added attributes, which depends on the 'BEAST2' package.
-
marg_log_lik
the marginal log likelihood estimate -
marg_log_lik_sd
the standard deviation around the estimate -
estimates
the parameter estimates created during the marginal likelihood estimation -
trees
the trees created during the marginal likelihood estimation
Author(s)
Richèl J.C. Bilderbeek
[Package babette version 2.3.4 Index]