eBird Data Extraction and Processing in R


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Documentation for package ‘auk’ version 0.4.3

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auk 'auk': eBird Data Extraction and Processing in R
auk_bbox Filter the eBird data by spatial bounding box
auk_bcr Filter the eBird data by Bird Conservation Region
auk_breeding Filter to only include observations with breeding codes
auk_clean Clean an eBird data file (Deprecated)
auk_complete Filter out incomplete checklists from the eBird data
auk_country Filter the eBird data by country
auk_county Filter the eBird data by county
auk_date Filter the eBird data by date
auk_distance Filter eBird data by distance travelled
auk_duration Filter the eBird data by duration
auk_ebd Reference to eBird data file
auk_ebd_version Get the EBD version and associated taxonomy version
auk_extent Filter the eBird data by spatial extent
auk_filter Filter the eBird file using AWK
auk_filter.auk_ebd Filter the eBird file using AWK
auk_filter.auk_sampling Filter the eBird file using AWK
auk_get_awk_path OS specific path to AWK executable
auk_get_ebd_path Return EBD data path
auk_last_edited Filter the eBird data by last edited date
auk_observer Filter the eBird data by observer
auk_project Filter the eBird data by project code
auk_protocol Filter the eBird data by protocol
auk_rollup Roll up eBird taxonomy to species
auk_sampling Reference to eBird sampling event file
auk_select Select a subset of columns
auk_set_awk_path Set a custom path to AWK executable
auk_set_ebd_path Set the path to EBD text files
auk_species Filter the eBird data by species
auk_split Split an eBird data file by species
auk_state Filter the eBird data by state
auk_time Filter the eBird data by checklist start time
auk_unique Remove duplicate group checklists
auk_version Versions of auk, the EBD, and the eBird taxonomy
auk_year Filter the eBird data to a set of years
auk_zerofill Read and zero-fill an eBird data file
auk_zerofill.auk_ebd Read and zero-fill an eBird data file
auk_zerofill.character Read and zero-fill an eBird data file
auk_zerofill.data.frame Read and zero-fill an eBird data file
bcr_codes BCR Codes
collapse_zerofill Read and zero-fill an eBird data file
ebird_species Lookup species in eBird taxonomy
ebird_states eBird States
ebird_taxonomy eBird Taxonomy
filter_repeat_visits Filter observations to repeat visits for hierarchical modeling
format_unmarked_occu Format EBD data for occupancy modeling with 'unmarked'
get_ebird_taxonomy Get eBird taxonomy via the eBird API
read_ebd Read an EBD file
read_ebd.auk_ebd Read an EBD file
read_ebd.character Read an EBD file
read_sampling Read an EBD file
read_sampling.auk_ebd Read an EBD file
read_sampling.auk_sampling Read an EBD file
read_sampling.character Read an EBD file
valid_protocols Valid Protocols