atlas.csv {atlas}

Queries ATLAS with a CSV() command and imports the contents of the csv into a data frame

Description

Queries ATLAS with a CSV() command and imports the contents of the csv into a data frame

Usage

atlas.csv(connection, query, file_name = NULL)

Arguments

connection

connection object returned from connect(url) function

query

ATLAS CSV query

file_name

if specified, stores the csv into the file_name, otherwise the temporary file used to download the data will be deleted after the data.frame is generated

Value

data frame containing CSV file

Examples

atlas.csv(atlas.connect('http://localhost:8080'), 'CSV(ICD9=250.50, CPT, LABS, ICD9)')
atlas.csv(atlas.connect('http://localhost:8080'), 'CSV(ICD9=250.50, CPT, LABS, ICD9)',
          '/output.csv')