check.loci {assignPOP} | R Documentation |
Check which loci frequently have high Fst across training sets
Description
This function reads through training locus file for each assignment test and counts the frequency of those loci and outputs the results in a text file.
Usage
check.loci(dir = NULL, top.loci = 20)
Arguments
dir |
A character string to specify the folder with your cross-validation results. A slash should be entered at the end. |
top.loci |
An integer to specify how many top informative loci to output. |
Value
This function output the results in a text file. It includes the top N informative loci in N rows, and each row has a list of loci sorted by its occurrence.
[Package assignPOP version 1.3.0 Index]