AromaTransform {aroma.core} | R Documentation |
The AromaTransform class
Description
Package: aroma.core
Class AromaTransform
Object
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ParametersInterface
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AromaTransform
Directly known subclasses:
public abstract static class AromaTransform
extends ParametersInterface
This abstract class represents a transform (algorithm/operator) that transforms data. A transform has an input data set, which is transformed into an output data set.
Usage
AromaTransform(dataSet=NULL, tags="*", ..., .reqSetClass="AromaMicroarrayDataSet")
Arguments
dataSet |
The input data set as an |
tags |
A |
... |
Not used. |
.reqSetClass |
Internal argument. |
Details
Subclasses must implement the process()
method.
Fields and Methods
Methods:
getFullName | Gets the full name of the output data set. | |
getInputDataSet | Gets the input data set. | |
getName | Gets the name of the output data set. | |
getOutputDataSet | Gets the transformed data set. | |
getPath | Gets the path of the output directory. | |
getRootPath | Gets the root path of the output directory. | |
getTags | Gets the tags of the output data set. | |
isDone | Checks if the data set is processed or not. | |
process | Processes the data set. | |
setTags | - | |
Methods inherited from ParametersInterface:
getParameterSets, getParameters, getParametersAsString
Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis
Author(s)
Henrik Bengtsson