Model {aroma.affymetrix}R Documentation

The Model class

Description

Package: aroma.affymetrix
Class Model

Object
~~|
~~+--ParametersInterface
~~~~~~~|
~~~~~~~+--Model

Directly known subclasses:
AffineCnPlm, AffinePlm, AffineSnpPlm, AlleleSummation, AvgCnPlm, AvgPlm, AvgSnpPlm, CrlmmModel, ExonRmaPlm, FirmaModel, HetLogAddCnPlm, HetLogAddPlm, HetLogAddSnpPlm, MbeiCnPlm, MbeiPlm, MbeiSnpPlm, MultiArrayUnitModel, ProbeLevelModel, RmaCnPlm, RmaPlm, RmaSnpPlm, SingleArrayUnitModel, UnitModel

public abstract static class Model
extends ParametersInterface

This class is abstract and represents a generic model that applies to a data set.

Usage

Model(dataSet=NULL, tags="*", ..., .onUnknownArgs=c("error", "warning", "ignore"))

Arguments

dataSet

The data set to which this model should be fitted.

tags

A character vector of tags to be appended to the tags of the input data set.

...

Not used.

.onUnknownArgs

A character string specifying what should occur if there are unknown arguments in ....

Fields and Methods

Methods:

fit -
getAsteriskTags -
getDataSet -
getFullName -
getName -
getPath -
getTags -
setTags -

Methods inherited from ParametersInterface:
getParameterSets, getParameters, getParametersAsString

Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis

Author(s)

Henrik Bengtsson


[Package aroma.affymetrix version 3.2.0 Index]